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BaseInfo

ncRNA ID novel_jre_miR189
Species Juglans regia
Class miRNA
Genome position NW_017443583.1:540822-540910 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170956;SRR1168796;SRR1170957;SRR1170958;SRR1170959;SRR1170960;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1168880;SRR1170969;SRR1170970;SRR1168795;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length 21
Mature sequence(if miRNA) 1 - UUCCACAGCUUUCUUGAACUU - 21
Stem-loop(if miRNA) --                 A     UUUUC     --A      U
  UUCCACAGCUUUCUUGA CUUCU     UGCUA   UUAAUC C
  ||||||||||||||||| |||||     |||||   |||||| U
  AGGGUGUCGAAAGAACU GAAGG     AUGAU   AAUUAG A
AG                 C     UCCCC     GAC      G
Stem-loop sequence UUCCACAGCUUUCUUGAACUUCUUUUUCUGCUAAUUAAUCUCUAGGAUUAACAGUAGUACCCCUGGAAGCUCAAGAAAGCUGUGGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018963043.1
ncRNA:21   UUCAAGUUCUUUCGACACCUU   1
  ==|*|*|||||||||||||||
targets:1948   GGGGUGAAGAAAGCUGUGGAA   1968

2.0 PREDICTED: Juglans regia putative calcium-transporting ATPase 13, plasma membrane-type (LOC108989440), mRNA NA coding protein psRNATarget
XM_018951417.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:118   GCGUUCAAGAAAGCCUGUGGAA   139

3.0 PREDICTED: Juglans regia growth-regulating factor 9-like (LOC108980479), mRNA NA coding protein psRNATarget
XM_018991736.1
ncRNA:21   UUCAAGUUCUUUCGA-CACCUU   1
  =*|||||||||||||-||||||
targets:868   GCGUUCAAGAAAGCUUGUGGAA   889

3.0 PREDICTED: Juglans regia growth-regulating factor 7-like (LOC109010816), mRNA NA coding protein psRNATarget
XM_018990768.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:599   GCGUUCAAGAAAGCCUGUGGAA   620

3.0 PREDICTED: Juglans regia growth-regulating factor 9-like (LOC109010054), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018990767.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:749   GCGUUCAAGAAAGCCUGUGGAA   770

3.0 PREDICTED: Juglans regia growth-regulating factor 9-like (LOC109010054), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018991131.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:785   GCGUUCAAGAAAGCCUGUGGAA   806

3.0 PREDICTED: Juglans regia growth-regulating factor 9 (LOC109010329), mRNA NA coding protein psRNATarget
XM_018963743.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:985   GCGUUCAAGAAAGCCUGUGGAA   1006

3.0 PREDICTED: Juglans regia growth-regulating factor 8-like (LOC108989955), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018963742.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  =*||||||||||||-|||||||
targets:988   GCGUUCAAGAAAGCCUGUGGAA   1009

3.0 PREDICTED: Juglans regia growth-regulating factor 8-like (LOC108989955), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019003915.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:994   UCGUUCAAGAAAGCCUGUGGAA   1015

3.0 PREDICTED: Juglans regia growth-regulating factor 6-like (LOC109021303), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019003914.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:995   UCGUUCAAGAAAGCCUGUGGAA   1016

3.0 PREDICTED: Juglans regia growth-regulating factor 6-like (LOC109021303), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018987240.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:784   CCGUUCAAGAAAGCCUGUGGAA   805

3.0 PREDICTED: Juglans regia growth-regulating factor 7-like (LOC109007541), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018978264.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:993   UCGUUCAAGAAAGCCUGUGGAA   1014

3.0 PREDICTED: Juglans regia growth-regulating factor 6-like (LOC109001120), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018978263.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:993   UCGUUCAAGAAAGCCUGUGGAA   1014

3.0 PREDICTED: Juglans regia growth-regulating factor 6-like (LOC109001120), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018981716.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:1007   UCGUUCAAGAAAGCCUGUGGAA   1028

3.0 PREDICTED: Juglans regia growth-regulating factor 1-like (LOC109003545), mRNA NA coding protein psRNATarget
XM_018987239.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:955   CCGUUCAAGAAAGCCUGUGGAA   976

3.0 PREDICTED: Juglans regia growth-regulating factor 7-like (LOC109007541), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018987237.1
ncRNA:21   UUCAAGUUCUUUCG-ACACCUU   1
  **||||||||||||-|||||||
targets:957   CCGUUCAAGAAAGCCUGUGGAA   978

3.0 PREDICTED: Juglans regia growth-regulating factor 7-like (LOC109007541), transcript variant X1, mRNA NA coding protein psRNATarget
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