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BaseInfo

ncRNA ID novel_jre_miR185
Species Juglans regia
Class miRNA
Genome position NW_017443576.1:267260-267405 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170955;SRR1170956;SRR1168796;SRR1170957;SRR1170962;SRR1170963;SRR1170965;SRR1168880;SRR1170969;SRR1170970;SRR1168795;SRR1168881;SRR1168883;SRR1168884
Length 24
Mature sequence(if miRNA) 1 - UGUGCAUGUCAGAAUUCUAACCCA - 24
Stem-loop(if miRNA) --    C                C   A  A G    C   GCAAUU       UUUAGC    -U      GA    CC
  UGUG AUGUCAGAAUUCUAAC CAA CA G UCUU GGU      ACUAGGG      CAAC  AGGUCU  UGGC  U
  |||| |||||||||||||||| ||| || | |||| |||      |||||||      ||||  ||||||  ||||  A
  ACAC UACAGUCUUAAGAUUG GUU GU C AGAA CCA      UGAUCCC      GUUG  UCUAGA  ACCG  C
CC    A                U   A  A A    A   ------       ------    UU      --    UU
Stem-loop sequence UGUGCAUGUCAGAAUUCUAACCCAAACAAGGUCUUCGGUGCAAUUACUAGGGUUUAGCCAACUAGGUCUGAUGGCCCUACUUGCCAAGAUCUUUGUUGCCCUAGUACCAAAGAACAUGAUUGUGUUAGAAUUCUGACAUACACACC