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BaseInfo

ncRNA ID	novel_jre_miR175
Species	Juglans regia
Class	miRNA
Genome position	NW_017443514.1:275006-275137 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170955;SRR1170956;SRR1168796;SRR1170958;SRR1170959;SRR1170960;SRR1170962;SRR1170963;SRR1170965;SRR1168880;SRR1170966;SRR1168795;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length	24
Mature sequence(if miRNA)	1 - AAUAGACAAGUCUCAUACAAGCCU - 24
Stem-loop(if miRNA)	--         GU          C    GU    A            -CU    AAAAUGAAAAAA   AAUAGACAA  CUCAUACAAG CUUU  AAAA AAUGGAUCCCAC   UAAA            A   |||||||||  |||||||||| ||||  |||| ||||||||||||   ||||            A   UUAUCUGUU  GAGUAUGUUC GAAA  UUUU UUACCUAGGGUG   AUUU            A GU         UG          A    AC    A            AUU    CUUAUCAAAAAA
Stem-loop sequence	AAUAGACAAGUCUCAUACAAGCCUUUGUAAAAAAAUGGAUCCCACCUUAAAAAAAUGAAAAAAAAAAAAAAACUAUUCUUUAUUAGUGGGAUCCAUUAUUUUCAAAAGACUUGUAUGAGGUUUGUCUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018950717.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1430   GGGCUUGCAUGAGACUUGUCUAUU   1453 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018950714.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1918   GGGCUUGCAUGAGACUUGUCUAUU   1941 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018950716.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:2036   GGGCUUGCAUGAGACUUGUCUAUU   2059 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018971339.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   |*||||||||||*||||||||||| targets:1047   AAGCUUGUAUGAAACUUGUCUAUU   1070 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108995726 (LOC108995726), mRNA	NA	coding protein	psRNATarget