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BaseInfo

ncRNA ID novel_jre_miR169
Species Juglans regia
Class miRNA
Genome position NW_017443281.1:704416-704464 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170965
Length 24
Mature sequence(if miRNA) 26 - AUGGUACCGUAGAGUCUGACGCAG - 49
Stem-loop(if miRNA) --     UU  C       U    
  GUGUU  AC CUACGGU CCGUU
  |||||  || ||||||| ||||U
  CGCAG  UG GAUGCCA GGUAU
GA     UC  A       U    
Stem-loop sequence GUGUUUUACCCUACGGUUCCGUUUUAUGGUACCGUAGAGUCUGACGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018964399.1
ncRNA:24   GAC----GCAGUCUGAGAUGCCAUGGUA   1
  |||----=||||*|||||||||||*|||
targets:158   CUGGUCUUGUCAUACUCUACGGUAGCAU   185

2.5 PREDICTED: Juglans regia ammonium transporter 3 member 1-like (LOC108990431), mRNA NA coding protein psRNATarget