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BaseInfo

ncRNA ID novel_jre_miR161
Species Juglans regia
Class miRNA
Genome position NW_017443009.1:2878603-2878680 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1168796;SRR1170956;SRR1170957;SRR1170958;SRR1170959;SRR1170960;SRR1170961;SRR1170963;SRR1170964;SRR1170965;SRR1168880;SRR1170967;SRR1170968;SRR1170969;SRR1168881;SRR1168884
Length 22
Mature sequence(if miRNA) 1 - UCCCUCAAAGGCUUCCAGCAUU - 22
Stem-loop(if miRNA) --     CA     -           -AA A    A   UC
  UCCCU  AAGGC UUCCAGCAUUC   C UGCU UGA  A
  |||||  ||||| |||||||||||   | |||| |||
  AGGGA  UUCCG AAGGUCGUGAG   G ACGA ACU  A
CA     -A     C           AGA C    -   UC
Stem-loop sequence UCCCUCAAAGGCUUCCAGCAUUCAACAUGCUAUGAUCAACUUCAAGCACGAGAGAGUGCUGGAACGCCUUAAGGGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018952504.1
ncRNA:22   UUACGACCUUCGGAAACUCCCU   1
  |||*||||||||||||||||||
targets:771   AAUACUGGAAGCCUUUGAGGGA   792

1.0 PREDICTED: Juglans regia DELLA protein RGL1-like (LOC108981380), mRNA NA coding protein psRNATarget