ncRNA ID | novel_jre_miR160 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443009.1:2873479-2873556 [+] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170955;SRR1168796;SRR1170956;SRR1170957;SRR1170958;SRR1170959;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1168880;SRR1170966;SRR1170967;SRR1170968;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168886 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCCCUCAAAGGCUUCCAGCAUU - 22 |
Stem-loop(if miRNA) |
--     CA     -           -AA A    A   UC   UCCCU  AAGGC UUCCAGCAUUC   C UGCU UGA  A   |||||  ||||| |||||||||||   | |||| |||   AGGGA  UUCCG AAGGUCGUGAG   G ACGA ACU  A CA     -A     C           AGA C    -   UC |
Stem-loop sequence | UCCCUCAAAGGCUUCCAGCAUUCAACAUGCUAUGAUCAACUUCAAGCACGAGAGAGUGCUGGAACGCCUUAAGGGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018952504.1 |
|
1.0 | PREDICTED: Juglans regia DELLA protein RGL1-like (LOC108981380), mRNA | NA | coding protein | psRNATarget |