ncRNA ID | novel_jre_miR154 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442865.1:395188-395268 [-] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170964;SRR1170966;SRR1168883 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAUUGAGCCAUGCCAAUAUC - 21 |
Stem-loop(if miRNA) |
--                      CA   CU     A      UGUUGGCAUGGUUCAGUCAGAU  AAG  CUCAA UAUA   ||||||||||||||||||||||  |||  ||||| |||U   AUAACCGUACCGAGUUAGUCUG  UUC  GGGUU AUGG CU                      AC   CU     A    |
Stem-loop sequence | UGUUGGCAUGGUUCAGUCAGAUCAAAGCUCUCAAAUAUAUGGUAAUUGGGUCCUUCAGUCUGAUUGAGCCAUGCCAAUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018969569.1 |
|
3.0 | PREDICTED: Juglans regia polycomb group protein EMBRYONIC FLOWER 2-like (LOC108994385), transcript variant X2, mRNA | NA | coding protein | psRNATarget |