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BaseInfo

ncRNA ID novel_jre_miR154
Species Juglans regia
Class miRNA
Genome position NW_017442865.1:395188-395268 [-]
Reference genome wgs.5d
Source SRR1168887;SRR1170964;SRR1170966;SRR1168883
Length 21
Mature sequence(if miRNA) 1 - UGAUUGAGCCAUGCCAAUAUC - 21
Stem-loop(if miRNA) --                      CA   CU     A   
  UGUUGGCAUGGUUCAGUCAGAU  AAG  CUCAA UAUA
  ||||||||||||||||||||||  |||  ||||| |||U
  AUAACCGUACCGAGUUAGUCUG  UUC  GGGUU AUGG
CU                      AC   CU     A   
Stem-loop sequence UGUUGGCAUGGUUCAGUCAGAUCAAAGCUCUCAAAUAUAUGGUAAUUGGGUCCUUCAGUCUGAUUGAGCCAUGCCAAUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018969569.1
ncRNA:21   CUAUAACCGUACCGAGUUAGU   1
  ***||||*||||||||||||*
targets:701   UCAAUUGCCAUGGCUCAAUCU   721

3.0 PREDICTED: Juglans regia polycomb group protein EMBRYONIC FLOWER 2-like (LOC108994385), transcript variant X2, mRNA NA coding protein psRNATarget