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BaseInfo

ncRNA ID	novel_jre_miR153
Species	Juglans regia
Class	miRNA
Genome position	NW_017440225.1:104766-104875 [-]
Reference genome	wgs.5d
Source	SRR1168796;SRR1170956
Length	24
Mature sequence(if miRNA)	1 - UUUCAAAGUGAUUGCACGGCACUU - 24
Stem-loop(if miRNA)	--A           G            ---      ------      UAU       UU    UGCCGUGCAGU ACUUUGAAAAAA   AGUAAA      GUCUAC   UAAAAAA  A    ||||||||||| ||||||||||||   ||||||      ||||||   |||||||  U    ACGGCACGUUA UGAAACUUUUUU   UUAUUU      UAGAUG   AUUUUUU  U UUC           G            CAC      AUGUAC      --U       UA
Stem-loop sequence	AUGCCGUGCAGUGACUUUGAAAAAAAGUAAAGUCUACUAUUAAAAAAUUAUUAUUUUUUUAUGUAGAUCAUGUAUUUAUUCACUUUUUUCAAAGUGAUUGCACGGCACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994468.1	ncRNA:24   UUCACGGCACGUUAGUGAAACUUU   1   ||||*|||||||=||||||||||| targets:1452   AAGUACCGUGCAGUCACUUUGAAA   1475 Target Full Sequence	1.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018952930.1	ncRNA:24   UUCACGGCACGUUAGUGAAACUUU   1   |||*|||*||||=||||||||||| targets:3183   AAGCGCCUUGCAGUCACUUUGAAA   3206 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018952929.1	ncRNA:24   UUCACGGCACGUUAGUGAAACUUU   1   |||*|||*||||=||||||||||| targets:3186   AAGCGCCUUGCAGUCACUUUGAAA   3209 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X1, mRNA	NA	coding protein	psRNATarget