| ncRNA ID | novel_jre_miR149 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017442845.1:106609-106743 [-] |
| Reference genome | wgs.5d |
| Source | SRR1168887;SRR1170955;SRR1170959;SRR1170964;SRR1170965;SRR1170970;SRR1168883;SRR1168884 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUGCGCACUCCACGACUGUAUGU - 24 |
| Stem-loop(if miRNA) |
--U - - A G --AAAAG U UA --A A UGCGGUCGUG AG GCGCAAUC UUUUG A UGAA AAA UGGGACUCAC UGAAAA U |||||||||| || |||||||| ||||| | |||| ||| |||||||||| |||||| U AUGUCAGCAC UC CGCGUUAG AGAAC U ACUU UUU ACCCUGGGUG AUUUUU A UGU C A C G CAACGAA U UC AUA A |
| Stem-loop sequence | UUGCGGUCGUGAGGCGCAAUCAUUUUGGAAAAAGUGAAUAAAUAUGGGACUCACAUGAAAAAUUAAUUUUUAAUAGUGGGUCCCACUUUUUUUCAAAGCAACUGCAAGACGAUUGCGCACUCCACGACUGUAUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018994468.1 |
|
1.0 | PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018960739.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized protein At1g28695-like (LOC108987746), transcript variant X1, mRNA | NA | coding protein | psRNATarget |