ncRNA ID | novel_jre_miR143 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442755.1:90430-90549 [+] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170955;SRR1170958;SRR1170959;SRR1170961;SRR1170962;SRR1170966;SRR1170967;SRR1170968;SRR1170969;SRR1170970;SRR1168883;SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 97 - AAAAGACUGUACGGCGCUUGCACC - 120 |
Stem-loop(if miRNA) |
--A                 G    GA         ---------   U -   UAU      AUU    GCAAGCGCCGUGCAGUC UUUU  AAAAAAGUG         GAG C CAU   UAAAAA   A    ||||||||||||||||| ||||  |||||||||         ||| | |||   ||||||   A    CGUUCGCGGCAUGUCAG AAAA  UUUUUUUAC         CUC G GUG   AUUUUU   U CCA                 -    AA         UUAUUUAUA   U A   --U      CUU |
Stem-loop sequence | AGCAAGCGCCGUGCAGUCGUUUUGAAAAAAAGUGGAGUCCAUUAUUAAAAAAUUAAUUUCUUUUUAUGUGAGUCUCAUAUUUAUUCAUUUUUUUAAAAAAGACUGUACGGCGCUUGCACC |