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BaseInfo

ncRNA ID novel_jre_miR137
Species Juglans regia
Class miRNA
Genome position NW_017442433.1:15733-15820 [-]
Reference genome wgs.5d
Source SRR1168887
Length 25
Mature sequence(if miRNA) 1 - GAAGUGUGUGCUGGUGUGGGACUGA - 25
Stem-loop(if miRNA) --  C                  -  ACC    GAGUGUAAGAA
  AG CUCACACCAGCACACACU CA   UAUU           A
  || |||||||||||||||||| ||   ||||           A
  UC GGGUGUGGUCGUGUGUGA GU   GUGA           A
AG  A                  A  GUA    AAAAAAAAAAA
Stem-loop sequence AGCCUCACACCAGCACACACUCAACCUAUUGAGUGUAAGAAAAAAAAAAAAAAAAAGUGAUGUGAAGUGUGUGCUGGUGUGGGACUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018973992.1
ncRNA:25   AGUCAGGGUGUGGUCGUGUGUGAAG   1
  |||**|||||||=||||||||||||
targets:187   UCAACCCCACACUAGCACACACUUC   211

1.5 PREDICTED: Juglans regia LRR receptor-like serine/threonine-protein kinase HSL2 (LOC108997635), mRNA NA coding protein psRNATarget
XM_018997046.1
ncRNA:25   AG--UCAGGGUGUGGUCGUGUGUGAAG   1
  ||--|*|=|||||||=|||||||||||
targets:1148   UCCAAAUUCCACACCGGCACACACUUC   1174

1.5 PREDICTED: Juglans regia uncharacterized LOC109014545 (LOC109014545), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018997047.1
ncRNA:25   AG--UCAGGGUGUGGUCGUGUGUGAAG   1
  ||--|*|=|||||||=|||||||||||
targets:1148   UCCAAAUUCCACACCGGCACACACUUC   1174

1.5 PREDICTED: Juglans regia uncharacterized LOC109014545 (LOC109014545), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018984050.1
ncRNA:25   AGUCAGGGUGUGGUCGUGUGUGAAG   1
  ||||*||||||||||||||||||**
targets:1224   UCAGCCCCACACCAGCACACACUCA   1248

2.5 PREDICTED: Juglans regia WRKY transcription factor 18-like (LOC109005228), mRNA NA coding protein psRNATarget