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BaseInfo

ncRNA ID	novel_jre_miR135
Species	Juglans regia
Class	miRNA
Genome position	NW_017442130.1:50496-50575 [-]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170964;SRR1170965
Length	21
Mature sequence(if miRNA)	60 - CAACACAAUCUCUGAUUCCCU - 80
Stem-loop(if miRNA)	--      A             --U  -    -UAG  U  U   CAACAC AUCUCUGAUUCCC   UC AUGC    GC AG C   |||||| |||||||||||||   || ||||    || || A   GUUGUG UAGAGACUAAGGG   GG UACG    CG UC U AU      G             UUG  A    UAAA  -  G
Stem-loop sequence	CAACACAAUCUCUGAUUCCCUUCAUGCUAGGCUAGUCAUGCUGCAAAUGCAUAGGGUUGGGAAUCAGAGAUGGUGUUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994658.1	ncRNA:21   UCCCUUAGUCUCUAACACAAC   1   =*|||=*|||||||||||||| targets:156   GUGGAGGCAGAGAUUGUGUUG   176 Target Full Sequence	2.0	PREDICTED: Juglans regia chromatin-remodeling complex subunit ies6 (LOC109012830), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994657.1	ncRNA:21   UCCCUUAGUCUCUAACACAAC   1   =*|||=*|||||||||||||| targets:323   GUGGAGGCAGAGAUUGUGUUG   343 Target Full Sequence	2.0	PREDICTED: Juglans regia chromatin-remodeling complex subunit ies6 (LOC109012830), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018994656.1	ncRNA:21   UCCCUUAGUCUCUAACACAAC   1   =*|||=*|||||||||||||| targets:446   GUGGAGGCAGAGAUUGUGUUG   466 Target Full Sequence	2.0	PREDICTED: Juglans regia chromatin-remodeling complex subunit ies6 (LOC109012830), transcript variant X1, mRNA	NA	coding protein	psRNATarget