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BaseInfo

ncRNA ID	novel_jre_miR133
Species	Juglans regia
Class	miRNA
Genome position	NW_017442067.1:159439-159525 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1168796;SRR1170955;SRR1170956;SRR1170957;SRR1170958;SRR1170959;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1168880;SRR1170965;SRR1170966;SRR1170967;SRR1170968;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168795;SRR1168886
Length	21
Mature sequence(if miRNA)	67 - UCGGACCAGGCUUCAUUCCCC - 87
Stem-loop(if miRNA)	--      CU           G C       AGCACA   CA G   GGAAUG  GUCUGGUUCGA A CAUUUGA      GAU  U A   ||||||  ||||||||||| | |||||||      |||  |   CCUUAC  CGGACCAGGCU U GUAAACU      CUA  A U CC      UU           G A       -AAAUA   AG C
Stem-loop sequence	GGAAUGCUGUCUGGUUCGAGACCAUUUGAAGCACAGAUCAUGAUCAGAAUCAUAAAUCAAAUGAUGUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018992312.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:1214   CUGGAAUGAAGCCUGGUCCGG   1234 Target Full Sequence	1.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-15 (LOC109011208), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992313.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:1836   CUGGAAUGAAGCCUGGUCCGG   1856 Target Full Sequence	1.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-15 (LOC109011208), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018989954.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:659   CUGGGAUGAAGCCUGGUCCGG   679 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-8-like (LOC109009482), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018972556.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:901   UUGGGAUGAAGCCUGGUCCGG   921 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-14-like (LOC108996578), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018972555.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1001   UUGGGAUGAAGCCUGGUCCGG   1021 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-14-like (LOC108996578), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018989955.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:966   CUGGGAUGAAGCCUGGUCCGG   986 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-8-like (LOC109009482), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992318.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1075   UUGGGAUGAAGCCUGGUCCGG   1095 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-14-like (LOC109011210), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018950208.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1019   CUGGGAUGAAGCCUGGUCCGG   1039 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-15-like (LOC108979516), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018950207.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1024   CUGGGAUGAAGCCUGGUCCGG   1044 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-15-like (LOC108979516), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992317.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1168   UUGGGAUGAAGCCUGGUCCGG   1188 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein ATHB-14-like (LOC109011210), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018963984.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1349   CUGGGAUGAAGCCUGGUCCGG   1369 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein REVOLUTA-like (LOC108990117), mRNA	NA	coding protein	psRNATarget
XM_018953220.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1417   CUGGGAUGAAGCCUGGUCCGG   1437 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein REVOLUTA-like (LOC108981958), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018953221.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:1417   CUGGGAUGAAGCCUGGUCCGG   1437 Target Full Sequence	2.0	PREDICTED: Juglans regia homeobox-leucine zipper protein REVOLUTA-like (LOC108981958), transcript variant X2, mRNA	NA	coding protein	psRNATarget