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BaseInfo

ncRNA ID	novel_jre_miR131
Species	Juglans regia
Class	miRNA
Genome position	NW_017441962.1:68402-68499 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170955;SRR1170959;SRR1170960;SRR1170964;SRR1170965;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length	21
Mature sequence(if miRNA)	78 - UGCCAAAGGAGAGUUGCCCUG - 98
Stem-loop(if miRNA)	--     C      C  A       ---    GGGU   -A  A     GU   GGGCG CUCUCC UU GCAGGUU   GGGA    AAU  UG GUAAU  A   ||||| |||||| || |||||||   ||||    |||  || |||||  U   CCCGU GAGAGG AA CGUUCAG   CCCU    UUA  AC CAUUA  A GU     U      A  C       UAU    AAUU   GA  -     AC
Stem-loop sequence	GGGCGCCUCUCCCUUAGCAGGUUGGGAGGGUAAUAUGAGUAAUGUAUACAAUUACCAAGAUUUUAAUCCCUAUGACUUGCCAAAGGAGAGUUGCCCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964644.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1179   UAGGGCAAAUCUCCUUUGGCA   1199 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964644.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   *=||||||*|||||||||||| targets:813   GGGGGCAAAUCUCCUUUGGCA   833 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964644.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:887   UUGGGCAAAUCUCCUUUGGCA   907 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1179   UAGGGCAAAUCUCCUUUGGCA   1199 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   *=||||||*|||||||||||| targets:813   GGGGGCAAAUCUCCUUUGGCA   833 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:887   UUGGGCAAAUCUCCUUUGGCA   907 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1224   UAGGGCAAAUCUCCUUUGGCA   1244 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1278   UAGGGCAAAUCUCCUUUGGCA   1298 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   ==||||||*|||||||||||| targets:820   UGGGGCAAAUCUCCUUUGGCA   840 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:898   UUGGGCAAAUCUCCUUUGGCA   918 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1224   UAGGGCAAAUCUCCUUUGGCA   1244 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1278   UAGGGCAAAUCUCCUUUGGCA   1298 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   ==||||||*|||||||||||| targets:820   UGGGGCAAAUCUCCUUUGGCA   840 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:898   UUGGGCAAAUCUCCUUUGGCA   918 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018952717.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   ||||||||||||=|||||||* targets:419   CAGGGCAACUCUUCUUUGGCU   439 Target Full Sequence	2.5	PREDICTED: Juglans regia inorganic phosphate transporter 1-4-like (LOC108981513), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018952713.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   ||||||||||||=|||||||* targets:539   CAGGGCAACUCUUCUUUGGCU   559 Target Full Sequence	2.5	PREDICTED: Juglans regia inorganic phosphate transporter 1-4-like (LOC108981513), transcript variant X1, mRNA	NA	coding protein	psRNATarget