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BaseInfo

ncRNA ID novel_jre_miR115
Species Juglans regia
Class miRNA
Genome position NW_017440353.1:44500-44626 [-]
Reference genome wgs.5d
Source SRR1168887;SRR1170965
Length 24
Mature sequence(if miRNA) 1 - AGACCCGUUUUAUCUCUGCCUUGG - 24
Stem-loop(if miRNA) -AAU   U       --C   U      UC      ---------CU  U         UUUAA     UU
    GGC GGAGGUA   UGG UCUUUG  AUUAAA           UG CGAUUCUGU     AGUGU  A
    ||| |||||||   ||| ||||||  ||||||           || |||||||||     |||||  U
    CCG UCUCUAU   GCC AGAAAC  UGGUUU           AC GCUAAGAUA     UUACG  U
GGUU   -       UUU   C      UA      ACAUUCGAUUU  U         -----     UC
Stem-loop sequence AAUGGCUGGAGGUACUGGUUCUUUGUCAUUAAACUUGUCGAUUCUGUUUUAAAGUGUUUAUUCUGCAUUAUAGAAUCGUCAUUUAGCUUACAUUUGGUAUCAAAGACCCGUUUUAUCUCUGCCUUGG