ncRNA ID | novel_jre_miR115 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017440353.1:44500-44626 [-] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGACCCGUUUUAUCUCUGCCUUGG - 24 |
Stem-loop(if miRNA) |
-AAU   U       --C   U      UC      ---------CU  U         UUUAA     UU     GGC GGAGGUA   UGG UCUUUG  AUUAAA           UG CGAUUCUGU     AGUGU  A     ||| |||||||   ||| ||||||  ||||||           || |||||||||     |||||  U     CCG UCUCUAU   GCC AGAAAC  UGGUUU           AC GCUAAGAUA     UUACG  U GGUU   -       UUU   C      UA      ACAUUCGAUUU  U         -----     UC |
Stem-loop sequence | AAUGGCUGGAGGUACUGGUUCUUUGUCAUUAAACUUGUCGAUUCUGUUUUAAAGUGUUUAUUCUGCAUUAUAGAAUCGUCAUUUAGCUUACAUUUGGUAUCAAAGACCCGUUUUAUCUCUGCCUUGG |