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BaseInfo

ncRNA ID novel_jre_miR114
Species Juglans regia
Class miRNA
Genome position NW_017440162.1:138878-138981 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1168796;SRR1170955;SRR1170956;SRR1170957;SRR1170958;SRR1170959;SRR1168795;SRR1170960;SRR1170962;SRR1170964;SRR1168880;SRR1170965;SRR1170966;SRR1170970;SRR1168881;SRR1168883;SRR1168884
Length 21
Mature sequence(if miRNA) 1 - UAUUGGCCUGGUUCACUCAGA - 21
Stem-loop(if miRNA) --       C       C      -------   A      C   UU   AA   U
  UAUUGGC UGGUUCA UCAGAA       GAA AAGAUG AUU  GCG  ACC C
  ||||||| ||||||| ||||||       ||| |||||| |||  |||  ||| A
  AUAACCG GCCGAGU AGUCUU       UUU UUCUAC UAG  CGU  UGG A
CU       U       U      UAUUUUU   C      -   -U   CG   G
Stem-loop sequence UAUUGGCCUGGUUCACUCAGAAGAAAAAGAUGCAUUUUGCGAAACCUCAAGGGUGCUGCUGAUCAUCUUCUUUUUUUUAUUUCUGAUUGAGCCGUGCCAAUAUC