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BaseInfo

ncRNA ID	novel_jre_miR104
Species	Juglans regia
Class	miRNA
Genome position	NW_017442638.1:159261-159387 [-]
Reference genome	wgs.5d
Source	SRR1168795;SRR1168887;SRR1168796;SRR1170955;SRR1170956;SRR1170958;SRR1170965;SRR1168880;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884;SRR1168886
Length	24
Mature sequence(if miRNA)	104 - AAUAGACAAGUCUCAUACAAGCCU - 127
Stem-loop(if miRNA)	--                          U      C A   GU      AA    UAAU   UUU   AAUAGACAAGUCUCAUACAAGCCUUU GUAAAA A UGG  CCCAUU  UAAA    AGU   C   |||||||||||||||||||||||||| |||||| | |||  ||||||  ||||    |||   U   UUAUCUGUUCAGAGUAUGUUCGGGAA CAUUUU U ACC  GGGUGG  AUUU    UCA   U GU                          -      U C   UG      -A    --UU   CAU
Stem-loop sequence	AAUAGACAAGUCUCAUACAAGCCUUUUGUAAAACAAUGGGUCCCAUUAAUAAAUAAUAGUUUUCUUUACACUUUUUUAAGGUGGGGUCCACUUUUUUACAAGGGCUUGUAUGAGACUUGUCUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018950717.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1430   GGGCUUGCAUGAGACUUGUCUAUU   1453 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018950714.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1918   GGGCUUGCAUGAGACUUGUCUAUU   1941 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018950716.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:2036   GGGCUUGCAUGAGACUUGUCUAUU   2059 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018971339.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   |*||||||||||*||||||||||| targets:1047   AAGCUUGUAUGAAACUUGUCUAUU   1070 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108995726 (LOC108995726), mRNA	NA	coding protein	psRNATarget