Search result

BaseInfo

ncRNA ID	novel_jre_miR75
Species	Juglans regia
Class	miRNA
Genome position	NW_017437071.1:10845-11007 [+]
Reference genome	wgs.5d
Source	SRR1168796;SRR1170957;SRR1170959;SRR1170966;SRR1170970
Length	23
Mature sequence(if miRNA)	141 - AUUCCACGACUGUAUAUAACAUU - 163
Stem-loop(if miRNA)	--  A  CU          -   A      C C A      --CGC   AAAAAAAAUGAAUAAAUAUGAGACCCACAUGAAA   UG UA  UGCAGUCGUG AGU UGUAAG G C UGCAGU     UUU                                  A   || ||  |||||||||| ||| |||||| | | ||||||     |||   AC AU  AUGUCAGCAC UUA GCGUUU C G ACGUCA     ACU                                  G UU  A  AU          C   C      A A C      AUAAA   UUUUCUCACACUAGGUGAUAAUUUUUUAAUUAAA
Stem-loop sequence	UGAUACUUGCAGUCGUGAGUAUGUAAGCGCCAUGCAGUCGCUUUAAAAAAAAUGAAUAAAUAUGAGACCCACAUGAAAAGAAAUUAAUUUUUUAAUAGUGGAUCACACUCUUUUUCAAAAUAACUGCACGACAUUUGCGCAUUCCACGACUGUAUAUAACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018967640.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||=||||||||||| targets:2070   AAUGUUACAUAUAGUCGUGGAAU   2092 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018967641.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||=||||||||||| targets:2120   AAUGUUACAUAUAGUCGUGGAAU   2142 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||||||||||*||| targets:1090   AAUGUUACAUACAGUCGUGAAAU   1112 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget