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BaseInfo

ncRNA ID novel_jre_miR69
Species Juglans regia
Class miRNA
Genome position NW_017413718.1:102-204 [-]
Reference genome wgs.5d
Source SRR1168887
Length 23
Mature sequence(if miRNA) 1 - UAUGAGGAUGAUAAGUAGAAUUU - 23
Stem-loop(if miRNA) --C       C       --              --UG    GAGAAAAAAAA
   UUCUACU AUCAUCC  AUACACUACAUAUU    GUAA           U
   ||||||| |||||||  ||||||||||||||    ||||           A
   AAGAUGA UAGUAGG  UAUGUGGUGUGUGG    UAUU           A
UUU       A       AG              UAUG    AGAAAAUAAAA
Stem-loop sequence CUUCUACUCAUCAUCCAUACACUACAUAUUUGGUAAGAGAAAAAAAAUAAAAAAUAAAAGAUUAUGUAUGGUGUGUGGUGUAUGAGGAUGAUAAGUAGAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018970059.1
ncRNA:23   UUUAAGAUGAAUAGUAGGAGUAU   1
  ****|||=|||||||||||||*|
targets:93   CUCAUCUGCUUAUCAUCCUCAAA   115

2.5 PREDICTED: Juglans regia uncharacterized LOC108994732 (LOC108994732), mRNA NA coding protein psRNATarget