| ncRNA ID | novel_jre_miR64 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017407400.1:39-265 [-] |
| Reference genome | wgs.5d |
| Source | SRR1168887;SRR1170964;SRR1170970;SRR1168884 |
| Length | 24 |
| Mature sequence(if miRNA) | 204 - AAAACCGGUUGUAUAAGAGAUGAU - 227 |
| Stem-loop(if miRNA) |
--AA G AA UUGCUCAUUACUUAUAAACAUGCCCA C GUCCACAGUCAAUGUGGGAUUAUUCCUCAACACCCUCCCUCACGUGCAGACCAGUAUUUUUUCUUG AACCGGUU UAU GAGAUGA AGA CUU U |||||||| ||| ||||||| ||| ||| C UUGGCCAA AUA CUCUACU GGU ACU C UAUG A -- -------------------CAAUCCG - UAAAGUAGUACCAUAGUCUCGGACGGUGUCCUGCUUACACCCGGAUGUGAUGAAUGGGGCACUGUU |
| Stem-loop sequence | AAAACCGGUUGUAUAAGAGAUGAUUGCUCAUUACUUAUAAACAUGCCCAAGACCUUGUCCACAGUCAAUGUGGGAUUAUUCCUCAACACCCUCCCUCACGUGCAGACCAGUAUUUUUUCUUGUCCUUGUCACGGGGUAAGUAGUGUAGGCCCACAUUCGUCCUGUGGCAGGCUCUGAUACCAUGAUGAAAUUCAUGGGCCUAACUCAUCUCAUAAAACCGGUUGUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018981759.1 |
|
0.0 | PREDICTED: Juglans regia uncharacterized LOC109003569 (LOC109003569), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018981760.1 |
|
0.0 | PREDICTED: Juglans regia uncharacterized LOC109003569 (LOC109003569), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_019001473.1 |
|
2.5 | PREDICTED: Juglans regia protein kinase 2B, chloroplastic-like (LOC109019223), mRNA | NA | coding protein | psRNATarget |