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BaseInfo

ncRNA ID	novel_jre_miR63
Species	Juglans regia
Class	miRNA
Genome position	NW_017402038.1:611-681 [+]
Reference genome	wgs.5d
Source	SRR1168887
Length	24
Mature sequence(if miRNA)	1 - AUUUCAACUCAUCUCAUCUCUGAA - 24
Stem-loop(if miRNA)	--      A                         A   AUUUCA CUCAUCUCAUCUCUGAAAACAAACG G   |||||| ||||||||||||||||||||||||| G   UAGAGU GAGUAGAGUAGAGGCUUUUGUUUGC C AU      A                         C
Stem-loop sequence	AUUUCAACUCAUCUCAUCUCUGAAAACAAACGAGGCCCGUUUGUUUUCGGAGAUGAGAUGAGAUGAGAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018988593.1	ncRNA:24   AAGUCUCUACUCUACUCAACUUUA   1   ||---||||||||||||||||||* targets:28   UU---AGAUGAGAUGAGUUGAAAG   48 Target Full Sequence	1.0	PREDICTED: Juglans regia uncharacterized LOC109008490 (LOC109008490), mRNA	NA	coding protein	psRNATarget
XM_018972115.1	ncRNA:24   AAGUCUCUACUCUACUCAACUUUA   1   ||--|||||||||||||||||=|| targets:2405   UU--GAGAUGAGAUGAGUUGAGAU   2426 Target Full Sequence	1.5	PREDICTED: Juglans regia pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like (LOC108996297), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983204.1	ncRNA:24   AAGU----CUCUACUCUACUCAACUUUA   1   *|||----|||||||||||||||||*|| targets:559   GUCACAGUGAGAUGAGAUGAGUUGAUAU   586 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC109004598 (LOC109004598), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983202.1	ncRNA:24   AAGU----CUCUACUCUACUCAACUUUA   1   *|||----|||||||||||||||||*|| targets:559   GUCACAGUGAGAUGAGAUGAGUUGAUAU   586 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC109004598 (LOC109004598), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018983200.1	ncRNA:24   AAGU----CUCUACUCUACUCAACUUUA   1   *|||----|||||||||||||||||*|| targets:559   GUCACAGUGAGAUGAGAUGAGUUGAUAU   586 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC109004598 (LOC109004598), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018972787.1	ncRNA:24   AAGUCUCUACUCUACUCAACUUUA   1   ||*|*||*|||||||||||||=|| targets:3908   UUAAAAGUUGAGAUGAGUUGAGAU   3931 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein At3g14460 (LOC108996772), mRNA	NA	coding protein	psRNATarget
XM_018950715.1	ncRNA:24   AAGUCUCUACUCUACUCAACUUUA   1   ||---||||||||||||||||=|* targets:10   UU---AGAUGAGAUGAGUUGAGAA   30 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108979922 (LOC108979922), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018975306.1	ncRNA:24   AAGU---CUCUACUCUACUCAACUUUA   1   ||*|---|||||||||||||*|||||* targets:1613   UUGAAAUGAGAUGAGAUGAGAUGAAAG   1639 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998660 (LOC108998660), transcript variant X2, mRNA	NA	coding protein	psRNATarget