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BaseInfo

ncRNA ID novel_jre_miR55
Species Juglans regia
Class miRNA
Genome position NW_017391260.1:1184-1300 [-]
Reference genome wgs.5d
Source SRR1168887
Length 24
Mature sequence(if miRNA) 1 - AGGAGUGUGUGAUGCUUGUGCACU - 24
Stem-loop(if miRNA) ----UG     U             UU    A     ------  GG    C   UAA    U
      UAAGC UCGCGCACUCUUU  AAAA UGAGU      GG  UCUA UAU   AAAA U
      ||||| |||||||||||||  |||| |||||      ||  |||| |||   ||||
      GUUCG AGUGUGUGAGGAA  UUUU AUUCA      UC  GGGU AUA   UUUU A
UCACGU     U             UU    C     UUUAUA  UU    -   UUC    A
Stem-loop sequence UGUAAGCUUCGCGCACUCUUUUUAAAAAUGAGUGGGGUCUACUAUUAAAAAAUUAAUUUUCUUAUAUGGGUUCUAUAUUUACUUACUUUUUUAAGGAGUGUGUGAUGCUUGUGCACU