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BaseInfo

ncRNA ID novel_jre_miR50
Species Juglans regia
Class miRNA
Genome position NW_017389891.1:992938-993085 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170955;SRR1170959;SRR1170969;SRR1170970;SRR1168883
Length 24
Mature sequence(if miRNA) 125 - AUGAUGAGAGUUAGGAUGAUGAAU - 148
Stem-loop(if miRNA) --        UC    UC      CU          C   A    A            ----------UG     UAUU
  UCAUUAUC  AACU  CAUCAU  UUUUAUCAUC UAU AUGU GUAUUAGGUGAU            GAAAU    U
  ||||||||  ||||  ||||||  |||||||||| ||| |||| ||||||||||||            |||||
  AGUAGUAG  UUGA  GUAGUA  AGAAUAGUAG GUA UACA CGUAAUUUACUA            CUUUA    A
UA        GA    GA      AG          A   C    C            UUCAAAUGUUCA     UAUU
Stem-loop sequence UCAUUAUCUCAACUUCCAUCAUCUUUUUAUCAUCCUAUAAUGUAGUAUUAGGUGAUUGGAAAUUAUUUAUUAUAUUUCACUUGUAAACUUAUCAUUUAAUGCCACAUCAUGAGAUGAUAAGAGAAUGAUGAGAGUUAGGAUGAUGAAU