ncRNA ID | novel_jre_miR50 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389891.1:992938-993085 [+] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170955;SRR1170959;SRR1170969;SRR1170970;SRR1168883 |
Length | 24 |
Mature sequence(if miRNA) | 125 - AUGAUGAGAGUUAGGAUGAUGAAU - 148 |
Stem-loop(if miRNA) |
--        UC    UC      CU          C   A    A            ----------UG     UAUU   UCAUUAUC  AACU  CAUCAU  UUUUAUCAUC UAU AUGU GUAUUAGGUGAU            GAAAU    U   ||||||||  ||||  ||||||  |||||||||| ||| |||| ||||||||||||            |||||   AGUAGUAG  UUGA  GUAGUA  AGAAUAGUAG GUA UACA CGUAAUUUACUA            CUUUA    A UA        GA    GA      AG          A   C    C            UUCAAAUGUUCA     UAUU |
Stem-loop sequence | UCAUUAUCUCAACUUCCAUCAUCUUUUUAUCAUCCUAUAAUGUAGUAUUAGGUGAUUGGAAAUUAUUUAUUAUAUUUCACUUGUAAACUUAUCAUUUAAUGCCACAUCAUGAGAUGAUAAGAGAAUGAUGAGAGUUAGGAUGAUGAAU |