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BaseInfo

ncRNA ID novel_jre_miR49
Species Juglans regia
Class miRNA
Genome position NW_017389887.1:47317-47419 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170959;SRR1170966
Length 21
Mature sequence(if miRNA) 1 - GAGCAUCUCCUGUUGGCAAGC - 21
Stem-loop(if miRNA) --     --      G       G U      A A  A    AUUUACAGA      U
  GAGCA  UCUCCU UUGGCAA C GUACUC C CU CAUC         GAAAAU U
  |||||  |||||| ||||||| | |||||| | || ||||         ||||||
  CUCGU  AGAGGA AACCGUU G CGUGAG G GA GUAG         CUUUUG A
GA     UU      -       G U      - A  A    ---------      G
Stem-loop sequence GAGCAUCUCCUGUUGGCAAGCUGUACUCACACUACAUCAUUUACAGAGAAAAUUUAGGUUUUCGAUGAAGAGGAGUGCUGGUUGCCAAAGGAGAUUUGCUCAG