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BaseInfo

ncRNA ID	novel_jre_miR45
Species	Juglans regia
Class	miRNA
Genome position	NW_017389844.1:1241298-1241380 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170957;SRR1170958;SRR1170959;SRR1168796;SRR1170961;SRR1170962;SRR1170965;SRR1170967;SRR1170968;SRR1168883;SRR1168795;SRR1168886
Length	22
Mature sequence(if miRNA)	62 - UCUUUCCUACUCCUCCCAUUCC - 83
Stem-loop(if miRNA)	--       A  -          CC    UGUUGUCA      U   AAUGGGA GA UAGGAAAGAA  AAAG        GAAACA C   ||||||| || ||||||||||  ||||        ||||||   UUACCCU CU AUCCUUUCUU  UUUC        UUUUGU U CC       C  C          UC    ----UUUC      U
Stem-loop sequence	AAUGGGAAGAUAGGAAAGAACCAAAGUGUUGUCAGAAACAUCUUUGUUUUCUUUCUUUCUUUCUUUCCUACUCCUCCCAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018960456.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||=|||||*||||||||=|||| targets:688   GGGAUGGGCGGAGUAGGGAAGA   709 Target Full Sequence	2.5	PREDICTED: Juglans regia TMV resistance protein N-like (LOC108987526), mRNA	NA	coding protein	psRNATarget
XM_018976503.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:592   GGCAUCGGAGGAUUAGGAAAGA   613 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108999602), partial mRNA	NA	coding protein	psRNATarget
XM_018969815.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:634   GGCAUCGGAGGAUUAGGAAAGA   655 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994564), mRNA	NA	coding protein	psRNATarget
XM_018969905.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:958   GGCAUCGGAGGAUUAGGAAAGA   979 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994623), mRNA	NA	coding protein	psRNATarget
XM_018969904.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:672   GGCAUCGGAGGAUUAGGAAAGA   693 Target Full Sequence	2.5	PREDICTED: Juglans regia disease resistance protein RGA2-like (LOC108994622), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018969903.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:759   GGCAUCGGAGGAUUAGGAAAGA   780 Target Full Sequence	2.5	PREDICTED: Juglans regia disease resistance protein RGA2-like (LOC108994622), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969898.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:919   GGCAUCGGAGGAUUAGGAAAGA   940 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018974438.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:678   GGCAUCGGAGGAUUAGGAAAGA   699 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108998016), mRNA	NA	coding protein	psRNATarget
XM_018969897.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:915   GGCAUCGGAGGAUUAGGAAAGA   936 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018976703.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:14   GGCAUCGGAGGAUUAGGAAAGA   35 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA4 (LOC108999812), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969895.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:803   GGCAUCGGAGGAUUAGGAAAGA   824 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA1 (LOC108994619), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018976704.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:14   GGCAUCGGAGGAUUAGGAAAGA   35 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA4 (LOC108999812), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018969894.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:715   GGCAUCGGAGGAUUAGGAAAGA   736 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994617), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_018969893.1	ncRNA:22   CCUUACCCUCCUCAUCCUUUCU   1   ||*||*||||||*||||||||| targets:715   GGCAUCGGAGGAUUAGGAAAGA   736 Target Full Sequence	2.5	PREDICTED: Juglans regia putative disease resistance protein RGA3 (LOC108994617), transcript variant X4, mRNA	NA	coding protein	psRNATarget