| ncRNA ID | novel_jre_miR40 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017389762.1:263966-264082 [+] |
| Reference genome | wgs.5d |
| Source | SRR1168887;SRR1170964 |
| Length | 24 |
| Mature sequence(if miRNA) | 94 - AAGAGAAUGUAUGAGGCUUGCACA - 117 |
| Stem-loop(if miRNA) |
-- A UG -- A ---- UG - --- UAA A UGUAA UUU UGCA CUC UUUGAAAAA AA GAGUC GG CCAC GAAAA A ||||| ||| |||| ||| ||||||||| || ||||| || |||| ||||| A ACGUU GGA AUGU GAG AAACUUUUU UU UUUAG CC GGUG CUUUU C AC C GU AA - CCAU CU A UUA -CA U |
| Stem-loop sequence | UGUAAAUUUUGUGCACUCAUUUGAAAAAAAUGGAGUCGGCCACUAAGAAAAAAACUUUUUCACGUGGAUUCCAGAUUUUCUUUACCUUUUUCAAAGAGAAUGUAUGAGGCUUGCACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_019004824.1 |
|
2.5 | PREDICTED: Juglans regia homeobox-leucine zipper protein HAT22-like (LOC109022041), mRNA | NA | coding protein | psRNATarget |