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BaseInfo

ncRNA ID	novel_jre_miR35
Species	Juglans regia
Class	miRNA
Genome position	NW_017389648.1:90904-91047 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170955;SRR1170960;SRR1168880;SRR1170961;SRR1170962;SRR1170963;SRR1170966;SRR1170967;SRR1170968
Length	24
Mature sequence(if miRNA)	1 - AAGUCUCACACUCUGCACACCACU - 24
Stem-loop(if miRNA)	--            -        CAC  A          A         U                   UUUC   AAGUCUCACACU CUGCACAC   UU AAAAAUAUGU AUUUUACUU UUUAUCCUUAUAUUUCAUA    A   |||||||||||| ||||||||   || |||||||||| ||||||||| |||||||||||||||||||   UUCAGAGUGUGA GACGUGUG   AA UUUUUGUAUA UAAAAUGAG AAAUGGGAGUAUAAAGUAU    U UA            A        -AU  A          C         U                   UUUA
Stem-loop sequence	AAGUCUCACACUCUGCACACCACUUAAAAAAUAUGUAAUUUUACUUUUUUAUCCUUAUAUUUCAUAUUUCAUAUUUUAUGAAAUAUGAGGGUAAAUGAGUAAAAUCAUAUGUUUUUAAAUAGUGUGCAGAAGUGUGAGACUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018978883.1	ncRNA:24   UCACCACACGUCUCACACUCUGAA   1   ||||||||||=||||*|||||||| targets:86   AGUGGUGUGCGGAGUUUGAGACUU   109 Target Full Sequence	2.5	PREDICTED: Juglans regia telomerase reverse transcriptase (LOC109001539), transcript variant X11, mRNA	NA	coding protein	psRNATarget