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BaseInfo

ncRNA ID	novel_jre_miR30
Species	Juglans regia
Class	miRNA
Genome position	NW_017389536.1:216075-216237 [+]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170970;SRR1168883;SRR1168795
Length	23
Mature sequence(if miRNA)	141 - AUUCCACGACUGUAUAUAACAUU - 163
Stem-loop(if miRNA)	--  A  CU          -                                 AGUGAAUAAAU     A  C  ---AU      AA   UG UA  UGCAGUCGUG AGUGUGCAAGCGUCGUGCAGUCGCUUUGAAAAA           AUGGA UC AC     GAAAAU  A   || ||  |||||||||| |||||||||||||||||||||||||||||||||           ||||| || ||     ||||||   AC AU  AUGUCAGCAC UUACGCGUUUGCGGCAUGUCAGCGAAAUUUUUU           UACCU AG UG     UUUUUA  U UU  A  AU          C                                 ---------AU     C  A  AUAAU      AU
Stem-loop sequence	UGAUACUUGCAGUCGUGAGUGUGCAAGCGUCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAUGGAAUCCACAUGAAAAUAAAUUAAUUUUUUAAUAGUAGACUCCAUUAUUUUUUAAAGCGACUGUACGGCGUUUGCGCAUUCCACGACUGUAUAUAACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018967640.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||=||||||||||| targets:2070   AAUGUUACAUAUAGUCGUGGAAU   2092 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018967641.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||=||||||||||| targets:2120   AAUGUUACAUAUAGUCGUGGAAU   2142 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:23   UUACAAUAUAUGUCAGCACCUUA   1   |||||||*|||||||||||*||| targets:1090   AAUGUUACAUACAGUCGUGAAAU   1112 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget