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BaseInfo

ncRNA ID	novel_jre_miR22
Species	Juglans regia
Class	miRNA
Genome position	NW_017389264.1:67940-68088 [-]
Reference genome	wgs.5d
Source	SRR1168887;SRR1170958;SRR1170959;SRR1168795
Length	21
Mature sequence(if miRNA)	129 - CCACAAAGAGAUUCCACAAAA - 149
Stem-loop(if miRNA)	--              C            C     A  GACA  C   C     A     UA   -       AC   CCACAAAGAGAUUC ACAAAAGUAAAC CACAA UU    UG CUU AUAUG UACGU  GAU GUGCUUU  A   |||||||||||||| |||||||||||| ||||| ||    || ||| ||||| |||||  ||| |||||||   GGUGUUUCUUUAAG UGUUUUCAUUUG GUGUU GA    AC GAA UAUAC AUGUA  CUA CAUGAAA  A UC              A            A     C  AUAC  U   A     C     GC   A       AU
Stem-loop sequence	CCACAAAGAGAUUCCACAAAAGUAAACCCACAAAUUGACAUGCCUUCAUAUGAUACGUUAGAUGUGCUUUACAAUAAAAGUACAAUCCGAUGUACCAUAUAAAGUCACAUAAGCUUGUGAGUUUACUUUUGUAGAAUUUCUUUGUGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018998716.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1320   UUUUGUAUAAUCUCUUUGUGA   1340 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109016293), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994023.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1320   UUUUGUAUAAUCUCUUUGUGA   1340 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109012407), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018994028.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1333   UUUUGUAUAAUCUCUUUGUGA   1353 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109012408), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994022.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1444   UUUUGUAUAAUCUCUUUGUGA   1464 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109012407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994021.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1491   UUUUGUAUAAUCUCUUUGUGA   1511 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109012407), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018998715.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1491   UUUUGUAUAAUCUCUUUGUGA   1511 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109016293), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018994027.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:1504   UUUUGUAUAAUCUCUUUGUGA   1524 Target Full Sequence	3.0	PREDICTED: Juglans regia inositol-tetrakisphosphate 1-kinase 1-like (LOC109012408), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018990649.1	ncRNA:21   AAAACACCUUAGAGAAACACC   1   ||||||**||||||||||||* targets:5953   UUUUGUAUAAUCUCUUUGUGU   5973 Target Full Sequence	3.0	PREDICTED: Juglans regia uncharacterized LOC109009965 (LOC109009965), transcript variant X1, mRNA	NA	coding protein	psRNATarget