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BaseInfo

ncRNA ID novel_jre_miR20
Species Juglans regia
Class miRNA
Genome position NW_017389245.1:1341402-1341471 [+]
Reference genome wgs.5d
Source SRR1168887;SRR1170955;SRR1170956;SRR1170957;SRR1170959;SRR1168796;SRR1170960;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1170968;SRR1170969;SRR1168880;SRR1168881;SRR1168883;SRR1168795;SRR1168884;SRR1168886
Length 21
Mature sequence(if miRNA) 50 - AGAUCAUGGGGCAGUUUCACC - 70
Stem-loop(if miRNA) --          AG        UAAA     UC UU
  UGAAGCUGCC  CAUGAUCU    CUUUC  C  U
  ||||||||||  ||||||||    |||||  |
  ACUUUGACGG  GUACUAGA    GAAAG  G  G
CC          -G        -CUA     GA UC
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUUAAACUUUCUCCUUUGCUGAGGAAAGAUCAGAUCAUGGGGCAGUUUCACC