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BaseInfo

ncRNA ID novel_jre_miR16
Species Juglans regia
Class miRNA
Genome position NW_017389148.1:95953-96004 [-]
Reference genome wgs.5d
Source SRR1168887;SRR1170956;SRR1170957;SRR1170958;SRR1168796;SRR1170959;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170970;SRR1168795;SRR1168884;SRR1168886
Length 24
Mature sequence(if miRNA) 1 - UAAGUGCCUCGUUGAGAAAAUACU - 24
Stem-loop(if miRNA) --   C                   U
  UGU UUCUCAACGAGGCACUUGG C
  ||| |||||||||||||||||||
  AUA AAGAGUUGCUCCGUGAAUU G
UC   A                   A
Stem-loop sequence UGUCUUCUCAACGAGGCACUUGGUCGAUUAAGUGCCUCGUUGAGAAAAUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018982159.1
ncRNA:24   UCAUAAAAGAGUUGCUCCGUGAAU   1
  |||=|||||||||=|||||||||=
targets:348   AGUGUUUUCUCAAUGAGGCACUUG   371

2.5 PREDICTED: Juglans regia tryptophan aminotransferase-related protein 2-like (LOC109003846), transcript variant X1, mRNA NA coding protein psRNATarget