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BaseInfo

ncRNA ID novel_jre_miR14
Species Juglans regia
Class miRNA
Genome position NW_017389110.1:323032-323148 [-]
Reference genome wgs.5d
Source SRR1168887
Length 24
Mature sequence(if miRNA) 1 - UACAUUGGUUGAUUGAAUUUAUUU - 24
Stem-loop(if miRNA) --    U          UG CA       A                        U  U
  AUAA UUCAAUCAAC  A  UAAUCAU UAAUUUAAUUAAAAAUAAAUUCAA UU A
  |||| ||||||||||  |  ||||||| |||||||||||||||||||||||| || U
  UAUU AAGUUAGUUG  U  AUUGGUA AUUAAAUUAAUUUUUAUUUAAGUU AA A
UU    U          GU AC       C                        C  A
Stem-loop sequence AUAAUUUCAAUCAACUGACAUAAUCAUAUAAUUUAAUUAAAAAUAAAUUCAAUUUUAUAAAACUUGAAUUUAUUUUUAAUUAAAUUACAUGGUUACAUUGGUUGAUUGAAUUUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018986056.1
ncRNA:24   UUUAUUUAAGUUAGUUGGUUACAU   1
  |=|*|||||||||||||||||*|*
targets:355   AGAAAAAUUCAAUCAACCAAUAUU   378

2.5 PREDICTED: Juglans regia UPF0664 stress-induced protein C29B12.11c-like (LOC109006691), mRNA NA coding protein psRNATarget
XM_018973707.1
ncRNA:24   UUUAUUUAAGUUAGUUGGUUACAU   1
  =||-|||||||||||||||||*|*
targets:496   GAA-AAAUUCAAUCAACCAAUAUU   518

2.5 PREDICTED: Juglans regia uncharacterized LOC108997431 (LOC108997431), mRNA NA coding protein psRNATarget