ncRNA ID | novel_jre_miR14 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389110.1:323032-323148 [-] |
Reference genome | wgs.5d |
Source | SRR1168887 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UACAUUGGUUGAUUGAAUUUAUUU - 24 |
Stem-loop(if miRNA) |
--    U          UG CA       A                        U  U   AUAA UUCAAUCAAC  A  UAAUCAU UAAUUUAAUUAAAAAUAAAUUCAA UU A   |||| ||||||||||  |  ||||||| |||||||||||||||||||||||| || U   UAUU AAGUUAGUUG  U  AUUGGUA AUUAAAUUAAUUUUUAUUUAAGUU AA A UU    U          GU AC       C                        C  A |
Stem-loop sequence | AUAAUUUCAAUCAACUGACAUAAUCAUAUAAUUUAAUUAAAAAUAAAUUCAAUUUUAUAAAACUUGAAUUUAUUUUUAAUUAAAUUACAUGGUUACAUUGGUUGAUUGAAUUUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018986056.1 |
|
2.5 | PREDICTED: Juglans regia UPF0664 stress-induced protein C29B12.11c-like (LOC109006691), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018973707.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108997431 (LOC108997431), mRNA | NA | coding protein | psRNATarget |