ncRNA ID | novel_jre_miR12 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389069.1:311569-311788 [+] |
Reference genome | wgs.5d |
Source | SRR1168887;SRR1170955;SRR1168883 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUUUCGUGAGACAGAAGACCUUC - 23 |
Stem-loop(if miRNA) |
--               AG               A    -AAAA             -C                UC    CACC        UC               A   UUUUCGUGAGACAGA  ACCUUCUUGUUCUUU AAAA     AAUCUUUUAUUUU  UUUUCAAUAAAAAAAA  AUGU    GUCGGUAU  GGUUUGGUGUGUCAA C   |||||||||||||||  ||||||||||||||| ||||     |||||||||||||  ||||||||||||||||  ||||    ||||||||  ||||||||||||||| G   AAAAGUAUUCUGUCU  UGGAAGAAUAAGAGA UUUU     UUAGAAAAUAAAA  AAAAGUUAUUUUUUUU  UACA    CAGCUAUG  CUAAACCACGCAGUU G UU               AA               G    AAAAG             AU                -U    AUCA        CA               C |
Stem-loop sequence | UUUUCGUGAGACAGAAGACCUUCUUGUUCUUUAAAAAAAAAAAUCUUUUAUUUUCUUUUCAAUAAAAAAAAUCAUGUCACCGUCGGUAUUCGGUUUGGUGUGUCAAACGGCUUGACGCACCAAAUCACGUAUCGACACUAACAUUUUUUUUUUAUUGAAAAUAAAAAUAAAAGAUUGAAAAUUUUGAGAGAAUAAGAAGGUAAUCUGUCUUAUGAAAAUU |