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BaseInfo

ncRNA ID	novel_jre_miR8
Species	Juglans regia
Class	miRNA
Genome position	NW_017389640.1:41834-41913 [-]
Reference genome	wgs.5d
Source	SRR1168886;SRR1168887;SRR1170955;SRR1170958;SRR1170959;SRR1170960;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170966;SRR1170967;SRR1168881;SRR1168883
Length	21
Mature sequence(if miRNA)	1 - UGCCAAAGGAGAAUUGCCCUG - 21
Stem-loop(if miRNA)	--GU     C              -     -----------U   A     GCAGU CUCCUUUGGCAGAG AGAAA            UGC C     ||||| |||||||||||||| |||||            |||     CGUUA GAGGAAACCGUCUU UCUUU            ACG U GUCC     A              G     UCAAUAUAUAAU   U
Stem-loop sequence	GUGCAGUCCUCCUUUGGCAGAGAGAAAUUGCACUUGCAUAAUAUAUAACUUUUCUGUUCUGCCAAAGGAGAAUUGCCCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964644.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1179   UAGGGCAAAUCUCCUUUGGCA   1199 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964644.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   *=||||||*|||||||||||| targets:813   GGGGGCAAAUCUCCUUUGGCA   833 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964644.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:887   UUGGGCAAAUCUCCUUUGGCA   907 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1179   UAGGGCAAAUCUCCUUUGGCA   1199 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   *=||||||*|||||||||||| targets:813   GGGGGCAAAUCUCCUUUGGCA   833 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018964643.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:887   UUGGGCAAAUCUCCUUUGGCA   907 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC108990632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1224   UAGGGCAAAUCUCCUUUGGCA   1244 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1278   UAGGGCAAAUCUCCUUUGGCA   1298 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   ==||||||*|||||||||||| targets:820   UGGGGCAAAUCUCCUUUGGCA   840 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992756.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:898   UUGGGCAAAUCUCCUUUGGCA   918 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1224   UAGGGCAAAUCUCCUUUGGCA   1244 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1278   UAGGGCAAAUCUCCUUUGGCA   1298 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   ==||||||*|||||||||||| targets:820   UGGGGCAAAUCUCCUUUGGCA   840 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992755.1	ncRNA:21   GUCCCGUUAAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:898   UUGGGCAAAUCUCCUUUGGCA   918 Target Full Sequence	1.5	PREDICTED: Juglans regia probable ubiquitin-conjugating enzyme E2 24 (LOC109011512), transcript variant X1, mRNA	NA	coding protein	psRNATarget