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BaseInfo

ncRNA ID novel_jre_miR6
Species Juglans regia
Class miRNA
Genome position NW_017389559.1:156260-156325 [+]
Reference genome wgs.5d
Source SRR1168886;SRR1168880;SRR1170963;SRR1170969;SRR1168884
Length 21
Mature sequence(if miRNA) 1 - UUUGGAUUGAAGGGAGCUGUA - 21
Stem-loop(if miRNA) --       U     GA C   AAACAUCUACAA
  UUUGGAU GAAGG  G UGU            U
  ||||||| |||||  | |||
  GAACCUA CUUCC  C ACA            A
GG       -     UC -   CCCCAACUCUUU
Stem-loop sequence UUUGGAUUGAAGGGAGCUGUAAACAUCUACAAUAUUUCUCAACCCCACACCUCCUUCAUCCAAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018974995.1
ncRNA:21   AU---GUCGAGGGAAGUUAGGUUU   1
  ||---|||||||||||||||||||
targets:725   UAUGCCAGCUCCCUUCAAUCCAAA   748

3.0 PREDICTED: Juglans regia uncharacterized LOC108998443 (LOC108998443), mRNA NA coding protein psRNATarget