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BaseInfo

ncRNA ID	novel_jre_miR5
Species	Juglans regia
Class	miRNA
Genome position	NW_017389496.1:62985-63149 [+]
Reference genome	wgs.5d
Source	SRR1168886;SRR1168884
Length	24
Mature sequence(if miRNA)	142 - AUUCCAUGACUGUAUGUAGCAUUA - 165
Stem-loop(if miRNA)	A       ---    A     -            U   A    C     A     AAUAAAUAAAUAUAAG CUCACAUGAAAAUAAAUU  UGAUGCU   UGCA UCGUG AGUGUGUAAGUG CGU CAGU GUUUU AAAAA                A                  A  |||||||   |||| ||||| |||||||||||| ||| |||| ||||| |||||                |  AUUACGA   AUGU AGUAC UUACGUAUUUGC GCA GUCA CAAAA UUUUU                C                  A -       UGU    C     C            U   C    A     C     ------------CUCA UCUAGAUGAUAAUUUUUU
Stem-loop sequence	AUGAUGCUUGCAAUCGUGAGUGUGUAAGUGUCGUACAGUCGUUUUAAAAAAAAUAAAUAAAUAUAAGACUCACAUGAAAAUAAAUUAAUUUUUUAAUAGUAGAUCUCACUCUUUUUCAAAACAACUGCACGUCGUUUAUGCAUUCCAUGACUGUAUGUAGCAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1051   UAAUGCUACAUACAGUUAUGGAAU   1074 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1580   UAAUGCUACAUACAGUUAUGGAAU   1603 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1653   UAAUGCUACAUACAGUUAUGGAAU   1676 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1877   UAAUGCUACAUACAGUUAUGGAAU   1900 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   |||||=||||||||||||||||=| targets:1886   UAAUGUUACAUACAGUCAUGGAGU   1909 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget