ncRNA ID | novel_jre_miR4 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389422.1:218294-218398 [+] |
Reference genome | wgs.5d |
Source | SRR1168886;SRR1170960;SRR1170961;SRR1170962;SRR1170963;SRR1170964;SRR1170965;SRR1170967;SRR1170968;SRR1170969;SRR1170970;SRR1168881;SRR1168883;SRR1168884 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUGGUGUGUAGAGUAUGAGACU - 24 |
Stem-loop(if miRNA) |
--                A  AG    AUGUUUAAA           GUGGG   AAGUGGUGUGUAGAGU UG  ACUU         AUUUUUCUUUG     G   |||||||||||||||| ||  ||||         |||||||||||     C   UUCACUACACAUCUCA AC  UGAA         UGAAGAGAAGU     A AA                C  CU    GAUUCAUCG           AGUAU |
Stem-loop sequence | AAGUGGUGUGUAGAGUAUGAGACUUAUGUUUAAAAUUUUUCUUUGGUGGGGCAUAUGAUGAAGAGAAGUGCUACUUAGAAGUUCCACACUCUACACAUCACUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018950294.1 |
|
2.5 | PREDICTED: Juglans regia dolichyl-phosphate beta-glucosyltransferase-like (LOC108979567), mRNA | NA | coding protein | psRNATarget |