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BaseInfo

ncRNA ID novel_gra_miR678
Species Gossypium raimondii
Class miRNA
Genome position Chr12:27440638-27440752 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - UAAAGAACGCUCCAAGCAGGAUGC - 24
Stem-loop(if miRNA) --U          C             CU       AA     -U     U CU   A
   AAAGAACGCU CAAGCAGGAUGCA  GUCAGUA  AGUAC  AAAAG G  UCU G
   |||||||||| |||||||||||||  |||||||  |||||  ||||| |  |||
   UUUUUUGCGA GUUCGUUCUGCGU  UAGUUGU  UCAUG  UUUUC C  AGG C
UCU          A             AC       CG     UC     C AU   U
Stem-loop sequence UAAAGAACGCUCCAAGCAGGAUGCACUGUCAGUAAAAGUACUAAAAGUGCUUCUAGCUGGAUACCCUUUUCUGUACUGCUGUUGAUCAUGCGUCUUGCUUGAAGCGUUUUUUUCU