ncRNA ID | novel_gra_miR674 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:7310949-7310992 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAAGUGCUGUGGAAAUGUGCUU - 22 |
Stem-loop(if miRNA) |
--  -  G    U  UU    U   GC CA UUCU CA  GCUU U   || || |||| ||  |||| G   CG GU AAGG GU  UGAA A UU  U  A    U  CG    A |
Stem-loop sequence | GCCAGUUCUUCAUUGCUUUUGAAAAGUGCUGUGGAAAUGUGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012621533.1 |
|
3.0 | PREDICTED: Gossypium raimondii bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like (LOC105792764), mRNA | bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like(LOC105792764) | coding protein | psRNATarget |