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BaseInfo

ncRNA ID novel_gra_miR674
Species Gossypium raimondii
Class miRNA
Genome position Chr11:7310949-7310992 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 22
Mature sequence(if miRNA) 1 - AAAGUGCUGUGGAAAUGUGCUU - 22
Stem-loop(if miRNA) --  -  G    U  UU    U
  GC CA UUCU CA  GCUU U
  || || |||| ||  |||| G
  CG GU AAGG GU  UGAA A
UU  U  A    U  CG    A
Stem-loop sequence GCCAGUUCUUCAUUGCUUUUGAAAAGUGCUGUGGAAAUGUGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012621533.1
ncRNA:22   UUCGUGUAAAGGUGUCGUGAAA   1
  ||*||=|*|||||||||||||*
targets:667   AAACAUAAUUCCACAGCACUUG   688

3.0 PREDICTED: Gossypium raimondii bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like (LOC105792764), mRNA bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like(LOC105792764) coding protein psRNATarget