ncRNA ID | novel_gra_miR664 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr2:62511183-62511236 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAUUGAGCUUGAAGUUUGAUCAU - 24 |
Stem-loop(if miRNA) |
--      U      -   UCU    UG   GAUCAA CUUUAA CUC   AUGU  C   |||||| |||||| |||   ||||  G   CUAGUU GAAGUU GAG   UACA  U UA      U      C   --U    UU |
Stem-loop sequence | GAUCAAUCUUUAACUCUCUAUGUUGCGUUUACAUUGAGCUUGAAGUUUGAUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012618356.1 |
|
2.5 | PREDICTED: Gossypium raimondii LOB domain-containing protein 16-like (LOC105790648), transcript variant X1, mRNA | LOB domain-containing protein 16-like(LOC105790648) | coding protein | psRNATarget |