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BaseInfo

ncRNA ID novel_gra_miR652
Species Gossypium raimondii
Class miRNA
Genome position Chr13:54372563-54372705 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 23
Mature sequence(if miRNA) 1 - UGCGUUGACGUGAACGUAUUUUC - 23
Stem-loop(if miRNA) --U           A   UA      -   UUAC      AAAA   U   A U   CGCGCUUUUGCCUGGCACAA
   GCGUUGACGUG ACG  UUUUCA GGA    AUGACC    GUG CCA G CAA                    A
   ||||||||||| |||  |||||| |||    ||||||    ||| ||| | |||
   CGCGACUGCAC UGC  AAAAGU CCU    UAUUGG    CCU UUU U GCG                    G
UUG           C   GC      U   ----      ---G   -   - -   AAGGUGCGGUUACAAAAAAG
Stem-loop sequence UGCGUUGACGUGAACGUAUUUUCAGGAUUACAUGACCAAAAGUGUCCAAGUCAACGCGCUUUUGCCUGGCACAAAGGAAAAAACAUUGGCGUGGAAGCGUUUUUCCGGGUUAUUCCUUGAAAACGCGUCCACGUCAGCGCGUU