ncRNA ID | novel_gra_miR649 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:4226010-4226072 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 40 - AUCGCGCUGACGUGGACGCGGUUU - 63 |
Stem-loop(if miRNA) |
--      CU     G A       UG       AUCGCG  UACGU G CGCGAUU  UUGCC   ||||||  ||||| | |||||||  ||||A   UGGCGC  GUGCA U GCGCUAA  AAUGC UU      AG     G C       UG     |
Stem-loop sequence | AUCGCGCUUACGUGGACGCGAUUUGUUGCCACGUAAGUAAUCGCGCUGACGUGGACGCGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012622070.1 |
|
1.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA | uncharacterized LOC105793143(LOC105793143) | coding protein | psRNATarget | |||||||||
XM_012622070.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA | uncharacterized LOC105793143(LOC105793143) | coding protein | psRNATarget |