| ncRNA ID | novel_gra_miR646 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr13:40751547-40751697 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616257 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUUAGGAUGAGUUUGGAUGGGCG - 24 |
| Stem-loop(if miRNA) |
--AUUU A A ---GC AC GUUAGUGUAAAAACAGCGGUGGCGGUGAGAUUAG AGG UG GUUUGGAUGGGCGGU GUUU UUGCG A ||| || ||||||||||||||| |||| ||||| UCC AC CAAACCUACCCGCUA CGCC ACGCC U GUUAAU C C ACCCA -- ACGCCAAUCGAAUGAAAAACAGAGUGCGAUGUCA |
| Stem-loop sequence | AUUUAGGAUGAGUUUGGAUGGGCGGUGCGUUUACUUGCGGUUAGUGUAAAAACAGCGGUGGCGGUGAGAUUAGAUACUGUAGCGUGAGACAAAAAGUAAGCUAACCGCACCGCACCGCACCCAAUCGCCCAUCCAAACCCACCCUUAAUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012586932.1 |
|
2.5 | PREDICTED: Gossypium raimondii protein RADIALIS-like 4 (LOC105767413), transcript variant X2, mRNA | protein RADIALIS-like 4(LOC105767413) | coding protein | psRNATarget | |||||||||
| XM_012615987.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105788907 (LOC105788907), mRNA | uncharacterized LOC105788907(LOC105788907) | coding protein | psRNATarget |