Search result

BaseInfo

ncRNA ID novel_gra_miR643
Species Gossypium raimondii
Class miRNA
Genome position Chr11:33027259-33027419 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - AAGGUCCUGGUCUUUAGUGGCGUU - 24
Stem-loop(if miRNA) --   UG      GU UU GU          G   GUGGAAA              GU UU GU              GU
  CGC  CUAAAG  C  G  CUUUAGCGGC UUU       AAGCGCCGCUAAAG  C  G  CUUUAGCGGCGUUU  G
  |||  ||||||  |  |  |||||||||| |||       ||||||||||||||  |  |  ||||||||||||||  G
  GCG  GAUUUC  G  C  GAAAUCGCCG GAA       UUUGCGGUGAUUUC  G  U  GAAAUCGCCGCGAA  G
UU   GU      UG UC UG          G   AAGGGUG              UG UU UG              AA
Stem-loop sequence CGCUGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGAAAAAGCGCCGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUUUUGGUCUUUAGUGGCGUUUGUGGGAAAAGGGCCGCUAAAGGUCCUGGUCUUUAGUGGCGUU