ncRNA ID | novel_gra_miR643 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:33027259-33027419 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGUCCUGGUCUUUAGUGGCGUU - 24 |
Stem-loop(if miRNA) |
--   UG      GU UU GU          G   GUGGAAA              GU UU GU              GU   CGC  CUAAAG  C  G  CUUUAGCGGC UUU       AAGCGCCGCUAAAG  C  G  CUUUAGCGGCGUUU  G   |||  ||||||  |  |  |||||||||| |||       ||||||||||||||  |  |  ||||||||||||||  G   GCG  GAUUUC  G  C  GAAAUCGCCG GAA       UUUGCGGUGAUUUC  G  U  GAAAUCGCCGCGAA  G UU   GU      UG UC UG          G   AAGGGUG              UG UU UG              AA |
Stem-loop sequence | CGCUGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGAAAAAGCGCCGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUUUUGGUCUUUAGUGGCGUUUGUGGGAAAAGGGCCGCUAAAGGUCCUGGUCUUUAGUGGCGUU |