| ncRNA ID | novel_gra_miR642 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr1:221069-221263 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616257 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GAAACUGUGAUUUCACGUCAUCCU - 24 |
| Stem-loop(if miRNA) |
-- C G C A C G A A A U C U C U CUC AAAA GAAA UGUGAUUUCAC UCAUC UUAUCUCU U UAAUA GA AAUGACA AUCA AUUU UC UU UGAUUUU AGC UUUUU UUGGA A |||| ||||||||||| ||||| |||||||| | ||||| || ||||||| |||| |||| || || ||||||| ||| ||||| ||||| CUUU GCACUAAAGUG AGUAG AAUAGGGA A AUUAU CU UUACUGU UAGU UAAA AG AG ACUAAAA UCG AAAAA AACCU U UA A G A A A A C G C U A U A U -UC AAAU |
| Stem-loop sequence | GAAACUGUGAUUUCACGUCAUCCUUAUCUCUAUCUAAUAGGAAAAUGACAAAUCAAAUUUUUCCUUUUGAUUUUCAGCUUUUUUCUCUUGGAAAAAAUUAAAUCCAACUAAAAAUGCUAAAAAUCAUGAAGAUAAAUCUGAUGUGUCAUUCUCAUAUUAAAAAGGGAUAAAGAUGAGGUGAAAUCACGAUUUCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012627220.1 |
|
2.5 | PREDICTED: Gossypium raimondii auxin response factor 7 (LOC105797241), mRNA | auxin response factor 7(LOC105797241) | coding protein | psRNATarget |