ncRNA ID | novel_gra_miR633 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr10:53695987-53696193 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 184 - AGGGAGGUAAUGGAGCUUAACGGU - 207 |
Stem-loop(if miRNA) |
--U     A                    CA     A          A     U      -------        A   --A  U  ---      GA    A     UU    GUUAA CUCUGUUACCUCCCUAAUGG  GUCCU CGUGGCAGUC AAAUG GUUUUA       ACUUGGAU UCC   GU GC   UCGGAU  AAAU UGUUU  A    ||||| ||||||||||||||||||||  ||||| |||||||||| ||||| ||||||       |||||||| |||   || ||   ||||||  |||| |||||    CAAUU GAGGUAAUGGAGGGAUUGCC  CAGGA GUACCGUCAG UUUAC CAAAAU       UGAACCUA AGG   CA UG   GGUUUA  UUUA AUAAA  A UGG     C                    AC     A          G     C      UUACGGU        C   AUG  C  UCA      -A    A     UU |
Stem-loop sequence | UGUUAAACUCUGUUACCUCCCUAAUGGCAGUCCUACGUGGCAGUCAAAAUGUGUUUUAACUUGGAUAUCCAGUUGCUCGGAUGAAAAUAUGUUUUUAAUUAAAUAAAUUUAAUUUGGACUGUCACGUAGGACAUCCAAGUUGGCAUUUAAAACCCAUUUGGACUGCCAUGAAGGACCACCGUUAGGGAGGUAAUGGAGCUUAACGGU |