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BaseInfo

ncRNA ID novel_gra_miR631
Species Gossypium raimondii
Class miRNA
Genome position Chr13:4389880-4389950 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 48 - UUUGAACCUGAACCUUGAGGGUUU - 71
Stem-loop(if miRNA) --      - C           GGU   A     CAA
  UUUGAA C UGAACCUUGAG   UUC AGAUU   G
  |||||| | |||||||||||   ||| |||||   G
  AGGCUU G ACUUGGAACUU   AAG UUUGA   U
UG      A A           ---   A     AUU
Stem-loop sequence UUUGAACCUGAACCUUGAGGGUUUCAAGAUUCAAGGUUUAAGUUUAGAAUUCAAGGUUCAAGAUUCGGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012617892.1
ncRNA:24   UUUGGGAGUUCCAAGUCCAAGUUU   1
  *|===||||||||||*|||||||*
targets:533   CAGUUCUCAAGGUUCUGGUUCAAC   556

2.5 PREDICTED: Gossypium raimondii proteasome subunit beta type-1 (LOC105790336), mRNA proteasome subunit beta type-1(LOC105790336) coding protein psRNATarget