ncRNA ID | novel_gra_miR631 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:4389880-4389950 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 48 - UUUGAACCUGAACCUUGAGGGUUU - 71 |
Stem-loop(if miRNA) |
--      - C           GGU   A     CAA   UUUGAA C UGAACCUUGAG   UUC AGAUU   G   |||||| | |||||||||||   ||| |||||   G   AGGCUU G ACUUGGAACUU   AAG UUUGA   U UG      A A           ---   A     AUU |
Stem-loop sequence | UUUGAACCUGAACCUUGAGGGUUUCAAGAUUCAAGGUUUAAGUUUAGAAUUCAAGGUUCAAGAUUCGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012617892.1 |
|
2.5 | PREDICTED: Gossypium raimondii proteasome subunit beta type-1 (LOC105790336), mRNA | proteasome subunit beta type-1(LOC105790336) | coding protein | psRNATarget |