| ncRNA ID | novel_gra_miR629 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr13:9756581-9756734 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616257 |
| Length | 21 |
| Mature sequence(if miRNA) | 134 - UUGCGAAGCUGAGAAGCUGGC - 154 |
| Stem-loop(if miRNA) |
-- C A UC - A G -----A GA A AG AAAAGAUAG A CAGCUUC CA CUUCGCAACAAGGAAAUAUG CUC AAG UG G AG UUGU CAA UUGUAC GCU C ||||||| || |||||||||||||||||||| ||| ||| || | || |||| ||| |||||| ||| GUCGAAG GU GAAGCGUUGUUUCUUUGUAC GAG UUC AC C UC AACG GUU AACAUG CGA A CG A C -C A A A GGAAGG AG - -A --------- G |
| Stem-loop sequence | CAGCUUCCCAACUUCGCAACAAGGAAAUAUGUCCUCAAGAUGGGAAGGAUUGUACAAAGUUGUACAAAAGAUAGGCUACAGAGCGUACAAAUUGGCAAGACUGGAAGGCACAACUUAGAGCCAUGUUUCUUUGUUGCGAAGCUGAGAAGCUGGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012629824.1 |
|
2.5 | PREDICTED: Gossypium raimondii ethylene-responsive transcription factor-like protein At4g13040 (LOC105799320), transcript variant X2, mRNA | ethylene-responsive transcription factor-like protein At4g13040(LOC105799320) | coding protein | psRNATarget | |||||||||
| XM_012629816.1 |
|
2.5 | PREDICTED: Gossypium raimondii ethylene-responsive transcription factor-like protein At4g13040 (LOC105799320), transcript variant X1, mRNA | ethylene-responsive transcription factor-like protein At4g13040(LOC105799320) | coding protein | psRNATarget |