ncRNA ID | ath-miR851-3p |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr3:19659532-19659715 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 46 - UGGGUGGCAAACAAAGACGAC - 66 |
Stem-loop(if miRNA) |
UUUUCUUUCUUUUCCUU    UU    UUUGGAAAGCA   -  C   CGUCUCGGUUCGCGAUCCACAAGUAAUCUUUUGUGGAGAUUAUGAAAACAAUCAUC                  UUCG  UGAU           AGG GA UGU                                                        A                  ||||  ||||           ||| || |||                  AAGU  ACUA           AAG UC AAG                                                        C ---------------UC    GU    ---------UA   U  -   ACUACCUUGACCUUAUCCCUAACAGCAGAAACAAACGGUGGGUGUGCAUCGGAGAG |
Stem-loop sequence | UUUUCUUUCUUUUCCUUUUCGUUUGAUUUUGGAAAGCAAGGGACUGUCGUCUCGGUUCGCGAUCCACAAGUAAUCUUUUGUGGAGAUUAUGAAAACAAUCAUCACGAGAGGCUACGUGUGGGUGGCAAACAAAGACGACAAUCCCUAUUCCAGUUCCAUCAGAACUUGAAAUAUCAUGUGAACU |
1 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |
2 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |