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BaseInfo

ncRNA ID ath-miR851-3p
Species Arabidopsis thaliana
Class miRNA
Genome position chr3:19659532-19659715 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 46 - UGGGUGGCAAACAAAGACGAC - 66
Stem-loop(if miRNA) UUUUCUUUCUUUUCCUU    UU    UUUGGAAAGCA   -  C   CGUCUCGGUUCGCGAUCCACAAGUAAUCUUUUGUGGAGAUUAUGAAAACAAUCAUC
                 UUCG  UGAU           AGG GA UGU                                                        A
                 ||||  ||||           ||| || |||
                 AAGU  ACUA           AAG UC AAG                                                        C
---------------UC    GU    ---------UA   U  -   ACUACCUUGACCUUAUCCCUAACAGCAGAAACAAACGGUGGGUGUGCAUCGGAGAG
Stem-loop sequence UUUUCUUUCUUUUCCUUUUCGUUUGAUUUUGGAAAGCAAGGGACUGUCGUCUCGGUUCGCGAUCCACAAGUAAUCUUUUGUGGAGAUUAUGAAAACAAUCAUCACGAGAGGCUACGUGUGGGUGGCAAACAAAGACGACAAUCCCUAUUCCAGUUCCAUCAGAACUUGAAAUAUCAUGUGAACU

Reference

1 PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana";
Rajagopalan R, Vaucheret H, Trejo J, Bartel DP;
Genes Dev. 20:3407-3425(2006).
2 PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes";
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC;
PLoS One. 2:e219(2007).