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BaseInfo

ncRNA ID	novel_gra_miR625
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr13:28315368-28315433 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	24
Mature sequence(if miRNA)	43 - ACGACAUCAGAAUUGGCGUGAACU - 66
Stem-loop(if miRNA)	-AC    UC     -   C     - UG A  UUC    GACA  AGAAU UGG GUGAA C  G GU   U    ||||  ||||| ||| ||||| |  | ||    UUGU  UCUUA ACC CACUU G  C CA   U AAU    --     G   U     U GU -  UGA
Stem-loop sequence	ACGACAUCAGAAUUGGCGUGAACUGGAGUUUCUUAGUACCUGGUUUCACUCCAGAUUCUUGUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012610885.1	ncRNA:24   UCAAGUGCGGUUAAGACUACAGCA   1   |||||||||||||||*|||||||| targets:1315   AGUUCACGCCAAUUCCGAUGUCGU   1338 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105784950 (LOC105784950), mRNA	uncharacterized LOC105784950(LOC105784950)	coding protein	psRNATarget
XM_012581706.1	ncRNA:24   UCAAGUGCGGUUAAGACUACAGCA   1   ||*|||||||||||||||||||*| targets:605   AGAUCACGCCAAUUCUGAUGUCAU   628 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105763457 (LOC105763457), mRNA	uncharacterized LOC105763457(LOC105763457)	coding protein	psRNATarget
XM_012602715.1	ncRNA:24   UCAAGUGCGGUUAAGACUACAGCA   1   |*||=|||||=||||*|||||||| targets:347   AAUUUACGCCGAUUCCGAUGUCGU   370 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105778960 (LOC105778960), mRNA	uncharacterized LOC105778960(LOC105778960)	coding protein	psRNATarget
XM_012606154.1	ncRNA:24   UCAAGUGCGGUUAAGACUACAGCA   1   |*|||||*||||||||*||||||| targets:230   AAUUCACACCAAUUCUUAUGUCGU   253 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105781634 (LOC105781634), mRNA	uncharacterized LOC105781634(LOC105781634)	coding protein	psRNATarget
XM_012592926.1	ncRNA:24   UCAAGUGCGGUUAAGACUACAGCA   1   ||*|*|*|||=||||||||||||* targets:1449   AGCUGAAGCCGAUUCUGAUGUCGA   1472 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii protein NETWORKED 2A-like (LOC105771457), mRNA	protein NETWORKED 2A-like(LOC105771457)	coding protein	psRNATarget